Imaging & BioInformatics Student Members (2004 - 2012)
All students that have actively contributed to the scientific work in our group are listed here.
| Student Members Computer Science (including mastertrack BioInformatics) Masters | ||
| Name | Curriculum |
Subject |
| Mehmet Kovacioglu grad. nov. 2006. |
Masters Thesis |
Finding and modelling edge information in 2D slices of 3D images (appl. embryos) |
| Simon de Haan grad. sep. 2004 |
PolyTech. |
Optimising protocol for Fluorescent ISH and ISH imaging. With Insitute for Biology Leiden (IBL) |
| Wouter Meuleman grad. sep. 2005 |
Masters Thesis | MicroArray Gene Expression Mining and Linking |
| Yun Bei grad. jul. 2005 |
Masters Thesis | Virtual Communities using the Image Database for eXchange |
| Jinshuo Liu grad. sep. 2005 |
Masters Thesis | Classification of yeast cells from images |
| Sander v d Maar grad. sep. 2007 |
Masters Project | User Interface TV/Video Programming |
| Tian Feng grad. jun. 2006 |
Masters Thesis | MicroArray image segmentation |
| Zan Li grad. jun. 2007 |
Masters Thesis | MicroArray image background correction |
| Jan Willem Klinkenberg grad. aug. 2007 |
Project |
3D tiling for CLSM |
| Yin Zhou grad. aug. 2006 |
Masters | CMS and workflow of educational resources in BioInformatics ICT & Business Masters |
| Laura Bertens grad. may 2007 |
Project Masters |
In Situ hybridisation of innate immune systemin Zebrafish; With Insitute for Biology Leiden (IBL) Image processing and classification of Yeast. With Centraal Bureau Schimmelcultures(CBS), Utrecht |
| Yini Bao grad. aug. 2007 |
Masters Project |
AJAX interfaces for LSIDx |
| Dorieke Schipper grad. sep. 2006 |
Masters | 3D position and orientation estimation |
| Willemijn Spoor grad. may 2007 |
Masters Project | Zebrafish atlas & Gene Expression With Insitute for Biology Leiden (IBL) |
| Alexander Nezhinsky grad. oct. 2007 |
Masters Project | Visualisation of Ontology |
| Marjolein Braak grad. sep. 2007 |
Masters Thesis | Surface Triangulation optimization |
| Aimy Sels grad. dec. 2007 |
Masters Thesis | Zebrafish atlas & Gene Expression With Insitute for Biology Leiden (IBL) |
| Xuan Wang grad. 2009 |
Software Project | Content Management System |
| Julio Pieroncielly grad. mar. 2009 |
Masters Project | Heterogeneous analysis of inate immune system in zebrafish |
| Elaisa van Leeuwen compl. oct. 2007 |
Bachelor Project |
3D reconstruction bile duct system. |
| Qurratulain Mubarak grad. jun. 2008 |
Masters Thesis | Modelling Biology with Paradigm |
| Eric Fadeev grad. jun. 2009 |
Masters Project | Query optimazation for spatio-temporal models |
| Zi Di grad. jun. 2009 |
Masters Thesis | Computation of axis 3D model |
| Kuan Yan grad. june 2008 |
Masters Thesis | Time resolved microscopy analysis |
| Bo Sobolewska switch to ICT&B |
Masters Project | Webservices for BioInformatics |
| Taco Buijtenhuis Compl. |
Research Project | Parallelization with REO, applied to image analysis. |
| Thijs Vermeulen | Bachelor Project | Image optimizationm feature extraction and classification in Neurobiology: "Dendritic Spines under Stress". |
| Jelle Oosterhof | Bachelor Project | Image optimizationm feature extraction and classification in Neurobiology: "Dendritic Spines under Stress". |
| Frank van Gemeren Compl. Dec. 2009 |
Bachelor Project | CMS Development kit |
| Taco Buijtenhuis | Masters Thesis | Evolutionary Algorithms in Image Processing |
| Arjen Assink grad. sep. 2010 |
Project Study | iPhone-Web App |
| Tim van Meurs grad. sep. 2010 |
Project Study | iPhone-Web App |
| Arjen Assink grad. sep. 2010 |
Thesis Project | Social Media in HRM |
| Mathijs Vlasveld grad. sep. 2010 |
Thesis Project | Web 2.0 in Communication Mananagement |
| Irene Martorelli grad. may 2012 |
Erasmus Exchange | Expert system for developmental timing in Zebrafish |
| Patric Stout | Research Project | Ontology Visualization |
| Willem Davids compl. aug. 2011 |
Bachelor Project | CSLM Imaging of Granulomas in Zebrafish With Insitute for Biology Leiden (IBL) |
| Jonathan Neuteboom compl. aug. 2011 |
Bachelor Project | Genome Analysis of Snails With Insitute for Biology Leiden (IBL) |
| Derk Geene compl. july 2012 |
Research Project | Active Shape Models in CLSM |
| GertJan den Heijer compl. jun 2012 |
Research Project | Texture analysis of Granulomas. |
| Derk Geene | Master Thesis | Active Shape Models for High-Throughput |
| Student Members Media & Technology Masters | ||
| Name | Subject |
Graduation |
| Maaike de Jong |
Interactive conflict coach | may 2006 |
| Anwar Sardha | Innovative visualization of ontologies. | |
| Danielle Loppe | Interactive coaching children with food allergy. | mar. 2008 |
| Abel Matahelumual | Interactive coaching children with food allergy. | mar. 2008 |
| Rewin Doekhi |
Visualisation & Virtualisation EM tomograms | sep. 2010 |
| Remco Waal |
AgressieVR, awareness tool for hospital personel |
mar. 2007 |
| Xander Witteveen |
Obedience | sep. 2007 |
| Roy Bijster |
Obedience | sep. 2007 |
| Yiwei Jiang |
Analyzing origin of Chinese Characters | mar. 2007 |
| Nick in het Veld | RSI in Gaming | sep. 2008 |
| Bob Cruijsberg |
Visualization social networks. | sep. 2007 |
| Loren Roosendaal | Virtual joy & game | mar. 2008 |
| Christina Papakonstantinou | Tag Searching and Semantics | sep. 2008 |
| Giannis Panagiotou | Tag Searching and Semantics | sep. 2008 |
| Sjoerd van Kranendonk | Gestures in music interaction | sep. 2009 |
| Job de Reus | Leading the blind on the web | sep. 2009 |
| Tiago Borges Coelho | Unintended Computation | sep. 2010 |
| Stelios Giannoulis | The Happiness Cube | mar. 2010 |
| Maarten Melenhorst | 3D manipulation device | mar. 2011 |
| Maarten van der Mark | Desktop Virtualization | mar. 2011 |
| Frank de Boer | A Virtual Window | mar. 2011 |
| Stijn Belle | Computer Handwriting | |
| Azita Amani | Virtual Museums | |
| Peter Curet | Tangible Visualization | |
| Vincent Vijn | ||
| Alwin Zwets | ||
| Berber de Vries | ||